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===== 3D MereoTopology  =====
Computes RCC8D relationship between 3D Objects.

===== Author =====
Thomas Boudier with the collaboration of G. Landini and D. Randell.

===== Description =====
Objects can have many relationship between them (inclusion, overlapping, ...). All the possible relationship are formalized in the MereoTopology approach (see [[https://blog.bham.ac.uk/intellimic/spatial-reasoning-with-imagej-using-the-region-connection-calculus/|Landini's page]] for details). 

You need two images with labelled objects.



===== Download =====
For details go to the [[plugin:stacks:3d_ij_suite:start|3D ImageJ Suite]].

===== Citation =====
When using the //3D Analysis// plugins for publication, please refer to :

J. Ollion, J. Cochennec, F. Loll, C. Escudé, T. Boudier. (**2013**) TANGO: A Generic Tool for High-throughput 3D Image Analysis for Studying Nuclear Organization. //Bioinformatics// 2013 Jul 15;29(14):1840-1. [[http://dx.doi.org/10.1093/bioinformatics/btt276|doi]]

DA. Randell, G. Landini,A. Galton. (**2012**) Discrete Mereotopology for Spatial Reasoning in Automated Histological Image Analysis. //IEEE Trans Pattern Anal Mach Intell.// 2012 May 31. [[http://dx.doi.org/10.1109/TPAMI.2012.128|doi]]

===== License =====
GPL distribution (see [[http://www.cecill.info/index.en.html|license]]). 


===== Changelog =====

  * 24/10/2013 core V2.7 : improved computation for isotropic analysis (//RX=RY=RZ//)
  * 27/04/2015 core V3.1 : bug in colocalisation (rare objects configuration)