plugin:inputoutput:lsmtoolbox:load_zeiss
/* * A simple example that shows how to use the JAVA reflection API to load * a ZEISS LSM image using LSM_Toolbox at ImageJ runtime. Questions and * comments to patrick@image-archive.org */ import ij.ImagePlus; import ij.plugin.PlugIn; import java.lang.reflect.InvocationTargetException; import java.lang.reflect.Method; public class test_OpenLSM implements PlugIn{ void test_openLSM(){ } public void testRun() { Class readerClass; try { // we want to execute public ImagePlus[] open(String directory, // String filename,boolean showInfoFrames, boolean verbose, boolean // thumb) readerClass = Class.forName("org.imagearchive.lsm.toolbox.Reader"); Object readerObject = readerClass.newInstance(); Class[] parameters = { String.class, String.class, Boolean.TYPE, Boolean.TYPE, Boolean.TYPE }; Method openMethod = readerClass.getMethod("open", parameters); Object[] arguments = {"directory_of_lsm_file", "my_lsmfile.lsm", false, false, false }; ImagePlus[] imps = (ImagePlus[]) openMethod.invoke(readerObject, arguments); // the following lines are just to show that it opened the files // correctly. Remove this in your plugin and do whatever you wish // with the ImagePlus[] if (imps != null) { for (int i = 0; i < imps.length; i++) { imps[i].show(); imps[i].updateAndDraw(); } } } catch (ClassNotFoundException e) { e.printStackTrace(); } catch (InstantiationException e) { e.printStackTrace(); } catch (IllegalAccessException e) { e.printStackTrace(); } catch (SecurityException e) { e.printStackTrace(); } catch (NoSuchMethodException e) { e.printStackTrace(); } catch (IllegalArgumentException e) { e.printStackTrace(); } catch (InvocationTargetException e) { e.printStackTrace(); } } @Override public void run(String arg) { testRun(); } }
plugin/inputoutput/lsmtoolbox/load_zeiss.txt ยท Last modified: 2019/04/12 13:13 by 127.0.0.1